The MOBIOS+: A FAIR (Findable, Accessible, Interoperable, and Reusable) Database for Mindanao's Terrestrial Biodiversity
Latest version published by Biodiversity Data Journal on 02 October 2023 Biodiversity Data Journal

The MOBIOS+ project has an overarching goal of establishing a biodiversity database for Mindanao following the FAIR principles (Findable, Accessible, Interoperable, and Reusable) principles to advance studies in biodiversity and develop a synthesis to identify current and future conservation priorities in the region. Furthermore, the MOBIOS+ database aims to mainstream rich and important biodiversity in Mindanao. This is through making occurrence records of species from studies from various institutions in Mindanao centralised in an accessible platform. To do this, we collated biodiversity records from published studies and organized them in a standard format, machine readable, and digitally available through the Global Biodiversity Information Facility (GBIF) platform. This project aims to continuously update the species database, complementing on-ground biodiversity efforts in Mindanao. The database is housed at the Biodiversity Synthesis Centre of the Eco/Con Lab at the Department of Biological Sciences, University of Southern Mindanao.

GBIF DwC-A EML RTF Versions Rights Cite this
Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 12,813 records.

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Downloads

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 12,813 records in English (352 kB) - Update frequency: continually
Metadata as an EML file download in English (17 kB)
Metadata as an RTF file download in English (13 kB)
Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Tanalgo K (2023): The MOBIOS+: A FAIR (Findable, Accessible, Interoperable, and Reusable) Database for Mindanao's Terrestrial Biodiversity. v1.8. Biodiversity Data Journal. Dataset/Occurrence. https://ipt.pensoft.net/resource?r=mobios_data&v=1.8

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is Biodiversity Data Journal. This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0 License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: ddd46c4c-1c7a-49d6-8420-0c8b34a94a53.  Biodiversity Data Journal publishes this resource, and is itself registered in GBIF as a data publisher endorsed by Participant Node Managers Committee.

Keywords

Occurrence; vertebrates; invertebrates; Arachnida; Insecta; Malacostraca; Bivalvia; Gastropoda; Actinopterygii; Amphibia; Reptilia; Aves; Mammalia; Philippines; Mindanao; Observation

Contacts

Who created the resource:

Krizler Tanalgo

Who can answer questions about the resource:

Krizler Tanalgo

Who filled in the metadata:

Krizler Tanalgo

Who else was associated with the resource:

Principal Investigator
Krizler Tanalgo
Geographic Coverage

Mindanao faunal region, south of the Philippines

Bounding Coordinates South West [-90, -180], North East [90, 180]
Taxonomic Coverage

The 12,814 georeferenced species occurrence is comprised of 1,926 species from 10 taxonomic classes. Invertebrates are represented by Gastropoda (27 spp., 1%), Bivalvia (4 spp., 0.20%), Arachnida (149 spp., 8%), Malacostraca (43 spp., 2%), and Insecta (866 spp., 45%). Whilst, the vertebrates are represented by Actinopterygii (176 spp., 9%), Amphibia (65 spp., 3%), Reptilia (135 spp., 7%), Aves (382 spp., 20%) and Mammalia (78 spp., 4%).

Class  Gastropoda (Gastropods),  Bivalvia (Bivalves),  Arachnida (Arachnids),  Malacostraca (Crabs),  Insecta (Insects),  Actinopterygii (Bony fishes),  Amphibia (Amphibians),  Reptilia (Reptiles),  Aves (Birds),  Mammalia (Mammals)
Temporal Coverage
Start Date / End Date 2000-01-01 / 2022-12-31
Project Data

The MOBIOS+ database currently contains information for 12,814 georeferenced species occurrences from 1,925 species from the Mindanao Faunal region (Mainland Mindanao and adjacent provinces in Visayas). The database represents at least ten taxonomic classes of terrestrial and freshwater fauna. This is the first database version that contains biodiversity records based on literature from the early 21st century for terrestrial fauna from the faunal region of Mindanao.

Title The MOBIOS+: A FAIR (Findable, Accessible, Interoperable, and Reusable) Database for Mindanao's Terrestrial Biodiversity
Funding The Biodiversity Community Integrated Knowledge Library (BiCIKL) project, funded by the European Union Horizon 2020 Research and Innovation Action under grant agreement No 101007492, has supported the publication of this work.
Study Area Description The database contains data for terrestrial and freshwater ecosystems in the entire faunal region of Mindanao, south of the Philippines.

The personnel involved in the project:

Content Provider
Kier Dela Cruz
Content Provider
Jeaneth Magelen Respicio
Sampling Methods

We applied the PRISMA approach to collect and select biodiversity studies from Mindanao from 2000-2023. We used the combinations of the following keywords: ‘Biodiversity stud*’, ‘Assessment*, ‘Survey’, ‘Terrestrial’, ‘Freshwater’, and ‘Mindanao’ to search for published literature from Google Scholar. We also explore the Biodiversity Literature Repository (BLR) (https://biolitrepo.org/) and the self-archiving ResearchGate (https://www.researchgate.net/) for additional published studies, particularly on new localities and natural history notes of species. We excluded the thesis and dissertation to standardise our database because most universities and academic institutions do not have online repositories to access their research. We then assigned teams to collect and analyze data from specific taxonomic groups. We sampled each literature for species occurrence from published articles and books using the Darwin Core Biodiversity Standard format (Wieczorek et al., 2012). We extracted information for the species list, taxonomic classification, conservation status, location of the species, and other relevant information.

Study Extent MOBIOS+ included occurrence records from 2000-2023. The database contains data for terrestrial and freshwater ecosystems in the entire faunal region of Mindanao, south of the Philippines.
Quality Control We countercurated all listed species and their distribution in the database using the Integrated Taxonomic Information System (ITIS) database (https://www.itis.gov/). We excluded dubious species, such as those with problematic identification or species that naturally do not occur in the range without proper discussions or expert clarifications. According to the Catalogue of Life, taxonomy names were aligned and standardised (https://www.catalogueoflife.org). We retained the taxonomic classification of species with confusing arrangements. We plotted and mapped all species occurrence within the boundaries of the Mindanao faunal region using QGIS (v. 3.26) (QGIS Development Team, 2022) to curate species occurrence within the range. Biodiversity records outside the range or within unusual locations were counter-checked with the original reference and corrected.

Method step description:

  1. 1. Collating and filtering published biodiversity studies from the Mindanao faunal region. 2. Reviewing of the studies for suitability based on criteria. 3. Extracting species occurrence data and other relevant metadata from biodiversity studies in Mindanao faunal region. 4. Placing the species distribution and other metadata in Microsoft Office Excel format. 5. Curating species occurrence in Quantum GIS. 6. Organising of occurrence dataset following Darwin Core Standards.
Additional Metadata