croplm
Data Records
The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 25 records.
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Downloads
Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:
Versions
The table below shows only published versions of the resource that are publicly accessible.
How to cite
Researchers should cite this work as follows:
Kermek D, Pischiutta N, Hlebec D (2024): croplm. v1.2. Biodiversity Data Journal. Dataset/Occurrence. https://ipt.pensoft.net/resource?r=croplm&v=1.2
Rights
Researchers should respect the following rights statement:
The publisher and rights holder of this work is Biodiversity Data Journal. This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0 License.
GBIF Registration
This resource has been registered with GBIF, and assigned the following GBIF UUID: f5b16e64-610a-4fcf-b46d-3efb068caaa1. Biodiversity Data Journal publishes this resource, and is itself registered in GBIF as a data publisher endorsed by Participant Node Managers Committee.
Keywords
Occurrence; Specimen; stoneflies; Medvednica Mt.; Croatia; biodiversity
Contacts
Who created the resource:
Who can answer questions about the resource:
Who filled in the metadata:
Who else was associated with the resource:
Geographic Coverage
Croatia (Medvednica Mt.)
Bounding Coordinates | South West [-90, -180], North East [90, 180] |
---|
Taxonomic Coverage
Stoneflies
Order | Plecoptera (Stoneflies) |
---|
Temporal Coverage
Start Date / End Date | 2021-06-17 / 2022-03-04 |
---|
Project Data
Medvednica Nature Park, located near Croatia's capital and largest city, Zagreb, experiences significant urbanization, which strongly impacts the fauna within this ecosystem. Surprisingly, despite the area's diverse (micro)habitats, including the discovery of several rare species previously unknown in the Croatian fauna, comprehensive field research on any group of organisms, coupled with an integrative approach, has never been conducted in this region. In this study, we present the first insights into the genetic and morphological diversity of stoneflies, one of the most endangered groups of organisms overall. Phylogenetic reconstructions and species delineation methods revealed significant intraspecific haplotype variation in most examined species (e.g., Brachyptera seticornis, Isoperla grammatica, and Leuctra braueri), except for Leuctra prima. Additionally, our study has identified isolated populations that merit further in-depth investigation concerning morphology, genetics, and ecology. These findings contribute valuable knowledge to the conservation of stoneflies in this area.
Title | Utilizing public sequence databases to identify genetic diversity of stoneflies in Medvednica Nature Park |
---|---|
Identifier | Dora Kermek, Nikola Pischiutta |
Funding | Croatian Science Foundation |
Study Area Description | Medvednica Mt., Croatia |
Design Description | Project provides the first insight into the genetic and morphological diversity of stoneflies in the Medvednica Nature Park, thereby contributing to the faunal knowledge of the area. Additionally, it establishes phylogenetic and phylogeographical relationships between populations of widely distributed species in Europe: Brachyptera seticornis, Isoperla grammatica, Leuctra braueri, and Leuctra prima. These relationships enhance understanding of diversification patterns and the biogeographic history of these selected stonefly species, emphasizing populations that warrant further detailed morphological, genetic, and ecological investigation. |
The personnel involved in the project:
Sampling Methods
Adults were collected using an entomological net while larvae were collected by hand under stones and branches.
Study Extent | Specimens were collected at eight sampling sites in Medvednica Nature Park. |
---|---|
Quality Control | All collected individuals were preserved in ethanol. Morphological determination of adults was conducted using a ZEISS SteREO Discovery V20 stereo microscope along with various identification keys. Due to the lack of identification keys the larvae were not determined to the species level. Larval identification was carried out by comparing their sequences with sequences available in databases. |
Method step description:
- Total genomic DNA was isolated from the tissues of one to three legs of adults and larvae using the GenElute Mammalian Genomic DNA Miniprep Kit. Chromatograms were analyzed and edited in Geneious Prime. Misread nucleotides were manually corrected. The presence of stop codons in all sequences was checked using Mesquite. Poor quality sequences and those containing stop codons were excluded from further analyses. For phylogeographic analyses, we selected species with a broader distribution and a larger number of COI sequences available in the BOLD and GenBank databases.
Collection Data
Collection Name | Collection Plecoptera Sivec&Hlebec |
---|
Specimen preservation methods | Alcohol |
---|
Curatorial Units | Between 488 and 512 vial |
---|
Additional Metadata
Alternative Identifiers | https://ipt.pensoft.net/resource?r=croplm |
---|